Abstract. Remote sensing of the atmospheric variables with the use of Lidar is a relatively new technology field for wind resource assessment in wind energy. A review of the draft version of an international guideline (CD IEC 61400-12-1 Ed.2) used for wind energy purposes is performed and some extra atmospheric variables are taken into account for proper representation of the site. A measurement campaign with two Leosphere vertical scanning WindCube Lidars and metmast measurements is used for comparison of the uncertainty in wind speed measurements using the CD IEC 61400-12-1 Ed.2. The comparison revealed higher but realistic uncertainties. A simple model for Lidar beam averaging correction is demonstrated for understanding deviation in the measurements. It can be further applied for beam averaging uncertainty calculations in flat and complex terrain.